I've thought along similar lines since I got my diagnosis. Hell, The Last Stand even introduces a 'cure' for mutants, and the debate very closely resembled the debate about the hypothetical (so far...) autism cure. If the analogy is continued, those pushing the 'cure' and restricting mutant rights are... well, those pushing a 'cure' and restricting autistic rights; Magneto and his gang are aspie supremacists; and Xavier, his friends, and the School are ASAN, Wrong Planet and the neurodiverse community/culture. I don't think that this was intentional, but rather the writers hypothesised such a scenario, then speculated about its consequences, and were quite accurate.
I am Jean Grey, apparently: "Intelligent but volatile, you are a well reasoned scholar who sometimes feels like a powder keg waiting to blow. You've been known to occasionally turn to the dark side, but ultimately you're still in touch with your own goodness."
Sounds about right.
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"?I love not man the less, but Nature more.? - Byron
"Just because you're paranoid, don't mean they're not after you" - Nirvana
I am an animal. Not normal is not bad. Question all. Life, liberty and the pursuit of happiness for all!